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Compute genetic distances by cluster

Source: R/cluster_stats.R
compute_genetic_distances_by_cluster.Rd

Calculate genetic distances for a set of cluster assignments.

Usage

compute_genetic_distances_by_cluster(isolate_lookup, snp_dist)

Arguments

isolate_lookup

Data frame with isolate lookup information.

snp_dist

Matrix of SNP distances between isolates.

Value

Data frame with genetic distances by cluster